STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR98143.1Hypothetical protein. (247 aa)    
Predicted Functional Partners:
EDR98144.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: bca:BCE_3271 8.9e-37 sensor histidine kinase; COG: COG0642 Signal transduction histidine kinase.
       0.773
EDR98145.1
Response regulator receiver domain protein; KEGG: fal:FRAAL1628 4.4e-35 response regulator in two-component regulatory system; COG: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; Psort location: Cytoplasmic, score: 9.98.
       0.773
EDR98142.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: efa:EF2297 4.0e-41 vanYB; D-alanyl-D-alanine carboxypeptidase K07260; COG: COG1876 D-alanyl-D-alanine carboxypeptidase; Psort location: CytoplasmicMembrane, score: 9.88.
       0.625
EDR98146.1
Hydrolase, NUDIX family; KEGG: lsa:LSA1593 4.2e-14 putative nucleotide diphosphate hydrolase, NUDIX family K01515; COG: COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; Psort location: Cytoplasmic, score: 8.87.
       0.548
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.