STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR98202.1[2Fe-2S]-binding domain protein; KEGG: ppr:PBPRA1428 7.4e-07 putative nitrite reductase (NAD(P)H), large subunit K00362; COG: COG1251 NAD(P)H-nitrite reductase; Psort location: Cytoplasmic, score: 8.87. (64 aa)    
Predicted Functional Partners:
EDR98880.1
Rubredoxin; KEGG: sat:SYN_02123 3.8e-29 ferric-chelate reductase / rubredoxin K00521; COG: COG1773 Rubredoxin.
  
 0.966
EDR97889.1
Metallo-beta-lactamase domain protein; KEGG: eci:UTI89_C3072 3.0e-45 norV; anaerobic nitric oxide reductase flavorubredoxin; COG: COG0426 Uncharacterized flavoproteins; Psort location: Cytoplasmic, score: 8.87.
  
 0.966
EDR98822.1
Rubredoxin; KEGG: ctc:CTC01387 2.3e-283 acyl-coA dehydrogenase K00248; COG: COG2025 Electron transfer flavoprotein, alpha subunit; Psort location: Cytoplasmic, score: 9.98.
  
 0.965
nifJ
Pyruvate synthase; KEGG: cno:NT01CX_1854 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K00168; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
  
 
 0.935
EDR98979.1
Rubredoxin; KEGG: cpr:CPR_0938 3.7e-196 periplasmic [Fe] hydrogenase 1 K00532; COG: COG4624 Iron only hydrogenase large subunit, C-terminal domain; Psort location: Cytoplasmic, score: 8.87.
  
 0.934
EDR99328.1
NADH oxidase; KEGG: fnu:FN0714 6.3e-43 NADH oxidase; COG: COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; Psort location: Cytoplasmic, score: 8.87.
    
 0.797
EDR97508.1
Oxidoreductase, FAD/FMN-binding protein; KEGG: fnu:FN0714 1.1e-52 NADH oxidase; COG: COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family; Psort location: Cytoplasmic, score: 8.87.
    
 0.797
EDR97516.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: afu:AF1262 3.4e-108 noxB-2; NADH oxidase (NoxB-2) K00359; COG: COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Psort location: Cytoplasmic, score: 8.87.
    
 0.797
EDR98130.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: lwe:lwe0460 2.4e-217 NADH:flavin oxidoreductase K00359; COG: COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Psort location: Cytoplasmic, score: 8.87.
    
 0.797
EDR95774.1
Pyridine nucleotide-disulfide oxidoreductase; KEGG: afu:AF0455 2.8e-88 noxB-1; NADH oxidase (NoxB-1) K00359; COG: COG0446 Uncharacterized NAD(FAD)-dependent dehydrogenases; Psort location: Cytoplasmic, score: 8.87.
    
 0.797
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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