STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR97418.1Cyclic nucleotide-binding domain protein; KEGG: eci:UTI89_C3860 0.0018 crp; CRP-cAMP transcriptional dual regulator K00924; COG: COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases; Psort location: Cytoplasmic, score: 8.87. (224 aa)    
Predicted Functional Partners:
nifJ
Pyruvate synthase; KEGG: cno:NT01CX_1854 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K00168; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
  
 
 0.943
EDR96379.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: dde:Dde_1697 2.0e-60 periplasmic sensor hybrid histidine kinase; COG: COG2202 FOG: PAS/PAC domain; Psort location: CytoplasmicMembrane, score: 9.49.
  
 0.895
EDR96761.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein; KEGG: vvy:VV2823 7.3e-65 signal transduction histidine kinase K07678; COG: COG0642 Signal transduction histidine kinase; Psort location: CytoplasmicMembrane, score: 10.00.
  
 0.861
EDR96640.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: shn:Shewana3_3829 7.1e-54 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) K01745; COG: COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; Psort location: Cytoplasmic, score: 9.98.
  
 0.861
EDR98526.1
Diguanylate cyclase (GGDEF) domain protein; KEGG: ava:Ava_1777 6.6e-46 metal dependent phosphohydrolase, HD region with response regulator receiver modulation K07814; COG: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; Psort location: Cytoplasmic, score: 9.98.
  
 0.859
EDR96976.1
MIP family channel protein; KEGG: fal:FRAAL3366 0.00015 putative arsenate reductase (partial match); COG: COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the MIP/aquaporin (TC 1.A.8) family.
   
 0.844
queD
Queuosine biosynthesis protein QueD; KEGG: cno:NT01CX_2384 2.9e-38 6-pyruvoyl tetrahydrobiopterin synthase, putative K01737; COG: COG0720 6-pyruvoyl-tetrahydropterin synthase; Psort location: Cytoplasmic, score: 8.87.
    
  0.829
EDR97419.1
4Fe-4S binding domain protein; KEGG: mka:MK0081 7.6e-07 porD; pyruvate:ferredoxin oxidoreductase, delta subunit K00171; COG: COG1145 Ferredoxin; Psort location: Cytoplasmic, score: 8.87.
 
   
 0.801
EDR95749.1
Selenium-dependent molybdenum hydroxylase 1; KEGG: rde:RD1_1533 3.5e-97 mop; aldehyde oxidoreductase, putative K00157; COG: COG1529 Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs; Psort location: CytoplasmicMembrane, score: 9.49.
    
 0.794
EDR98793.1
KEGG: ava:Ava_1030 2.1e-28 putative diguanylate cyclase (GGDEF domain) K02488; COG: COG5001 Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain; Psort location: Cytoplasmic, score: 9.98.
   
 0.785
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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