STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR97462.1Ankyrin repeat protein; KEGG: hsa:80351 0.00017 TNKS2; tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2 K00774; COG: COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases. (541 aa)    
Predicted Functional Partners:
EDR97463.1
RHS repeat-associated core domain protein; KEGG: cal:orf19.4072 4.0e-13 HYR10; similar to cell surface flocculin K01186; COG: COG3209 Rhs family protein; Psort location: Cellwall, score: 9.38.
 
     0.930
EDR96625.1
Hypothetical protein; KEGG: cal:orf19.985 0.0048 conserved hypothetical protein K01553; COG: COG1316 Transcriptional regulator.
  
     0.758
EDR95711.1
Tetratricopeptide repeat protein; KEGG: ddi:DDB0185614 0.00026 hypothetical protein K05864; COG: COG0457 FOG: TPR repeat.
  
     0.737
EDR96241.1
Spore germination protein (amino acid permease); COG: NOG13194 non supervised orthologous group; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.733
EDR96242.1
Hypothetical protein.
  
     0.722
EDR96933.1
PPIC-type PPIASE domain protein; KEGG: cno:NT01CX_1021 1.8e-15 parvulin-like peptidyl-prolyl isomerase K01802; COG: COG0760 Parvulin-like peptidyl-prolyl isomerase.
  
     0.715
EDR96714.1
Hypothetical protein; KEGG: rha:RHA1_ro04199 2.5e-10 DNA polymerase III subunit K00961; COG: COG4995 Uncharacterized protein conserved in bacteria; Psort location: Extracellular, score: 7.62.
  
     0.714
EDR97225.1
Hypothetical protein.
  
     0.711
cvpA
CvpA family protein; COG: COG1286 Uncharacterized membrane protein, required for colicin V production; Psort location: CytoplasmicMembrane, score: 9.99.
  
     0.711
EDR97467.1
Transcriptional regulator, BlaI/MecI/CopY family; KEGG: bcz:BCZK0993 2.1e-05 blaI; beta-lactamase (penicillinase) repressor K01467; COG: COG3682 Predicted transcriptional regulator; Psort location: Cytoplasmic, score: 8.87.
 
     0.683
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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