STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR96868.1DnaD domain protein; COG: COG3935 Putative primosome component and related proteins; Psort location: Cytoplasmic, score: 8.87. (336 aa)    
Predicted Functional Partners:
EDR96869.1
Putative DNA replication protein DnaC; KEGG: spi:MGAS10750_Spy1680 2.3e-12 replicative DNA helicase K01529; COG: COG1484 DNA replication protein; Psort location: Cytoplasmic, score: 8.87.
 
  
 0.971
EDR95894.1
Hypothetical protein; COG: NOG13733 non supervised orthologous group; Psort location: Cytoplasmic, score: 8.87.
  
     0.752
secG
Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.
  
   
 0.729
EDR96852.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
     0.680
EDR99056.1
Hypothetical protein.
 
     0.671
EDR97636.1
Hypothetical protein; COG: NOG17868 non supervised orthologous group.
  
     0.648
rpoZ
DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.643
EDR99064.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: csa:Csal_1545 1.3e-59 peptidoglycan glycosyltransferase K05364; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score: 9.82.
 
     0.624
EDR99379.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.99.
 
     0.621
EDR96496.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 9.75.
  
     0.605
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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