STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR96801.1KEGG: lwe:lwe1837 7.9e-29 rpe; ribulose-phosphate 3-epimerase K01783; COG: COG0036 Pentose-5-phosphate-3-epimerase. (219 aa)    
Predicted Functional Partners:
EDR97323.1
Transketolase, thiamine diphosphate binding domain protein; KEGG: bld:BLi00495 1.1e-72 hypothetical protein K00615; COG: COG3959 Transketolase, N-terminal subunit; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.888
EDR98465.1
Transketolase, thiamine diphosphate binding domain protein; KEGG: cpf:CPF_0292 9.2e-90 putative transketolase, N-terminal subunit K00615; COG: COG3959 Transketolase, N-terminal subunit; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.868
nifJ
Pyruvate synthase; KEGG: cno:NT01CX_1854 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K00168; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
    
 0.848
EDR98464.1
Transketolase, pyridine binding domain protein; KEGG: cno:NT01CX_1268 6.4e-98 transketolase, C-terminal subunit K00615; COG: COG3958 Transketolase, C-terminal subunit; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.842
EDR97322.1
Transketolase, C-terminal domain protein; KEGG: bld:BLi00496 2.6e-78 hypothetical protein K00615; COG: COG3958 Transketolase, C-terminal subunit; Psort location: Cytoplasmic, score: 8.87.
 
 
 0.842
rpiB-2
KEGG: tte:TTE0146 7.7e-54 rpiB; ribose 5-phosphate isomerase B K01808; COG: COG0394 Protein-tyrosine-phosphatase; Psort location: Cytoplasmic, score: 8.87; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
 
 0.830
metK
Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.
 
 
 
 0.725
EDR98900.1
KEGG: pac:PPA0454 1.1e-77 transaldolase K00616; COG: COG0176 Transaldolase; Psort location: Cytoplasmic, score: 8.87.
 
 0.722
EDR98960.1
Kinase, PfkB family; KEGG: ser:SERP1494 1.0e-74 fructokinase, putative K00847; COG: COG0524 Sugar kinases, ribokinase family; Psort location: Cytoplasmic, score: 9.98.
  
 0.682
EDR98981.1
Kinase, PfkB family; KEGG: ser:SERP2100 6.5e-25 rbsK; ribokinase K00852; COG: COG0524 Sugar kinases, ribokinase family; Psort location: Cytoplasmic, score: 9.98.
  
 0.682
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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