STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR96704.1Cupin domain protein. (241 aa)    
Predicted Functional Partners:
EDR96705.1
Putative sugar-binding domain protein; KEGG: cpr:CPR_1160 5.5e-21 citrate lyase regulator, putative K00863; COG: COG2390 Transcriptional regulator, contains sigma factor-related N-terminal domain; Psort location: Cytoplasmic, score: 8.87.
  
    0.727
EDR98306.1
Cupin domain protein; Psort location: Cytoplasmic, score: 8.87.
  
 0.706
purB
Adenylosuccinate lyase; KEGG: cpf:CPF_1922 8.9e-179 purB; adenylosuccinate lyase K01756; COG: COG0015 Adenylosuccinate lyase; Psort location: Cytoplasmic, score: 8.87.
   
 0.639
EDR98449.1
Chorismate mutase; KEGG: deh:cbdb_A424 7.4e-49 pheA; chorismate mutase/prephenate dehydratase (P-protein) K04093:K04518; COG: COG0077 Prephenate dehydratase; Psort location: Cytoplasmic, score: 9.98.
  
 
 0.629
EDR97834.1
Hypothetical protein; Psort location: Cytoplasmic, score: 8.87.
  
  
 0.621
metG
methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
 0.604
EDR95939.1
Peptidase, M24 family; KEGG: fnu:FN0453 2.1e-122 Xaa-Pro aminopeptidase K01262; COG: COG0006 Xaa-Pro aminopeptidase; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.586
EDR97257.1
Acetyltransferase, GNAT family; KEGG: tth:TTC0848 6.0e-15 acetyltransferase K00680; COG: COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; Psort location: Cytoplasmic, score: 8.87.
  
 
 0.578
EDR97555.1
KEGG: hhe:HH1468 8.5e-16 4-carboxymuconolactone decarboxylase K01607; COG: COG0599 Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit; Psort location: Cytoplasmic, score: 8.87.
    
 0.560
EDR97556.1
Hypothetical protein; COG: COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain.
    
 0.560
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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