STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR96117.1Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: tte:TTE0925 4.0e-57 dacC; D-alanyl-D-alanine carboxypeptidase K01286; COG: COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family. (374 aa)    
Predicted Functional Partners:
EDR99023.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: bsu:BG10295 1.4e-79 dacF; penicillin-binding protein (D-alanyl-D-alanine carboxypeptidase) K07258; COG: COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
 
  
0.845
EDR97534.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: tte:TTE1328 2.1e-51 dacC3; D-alanyl-D-alanine carboxypeptidase K07258; COG: COG1686 D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
  
  
 
0.832
EDR98142.1
Serine-type D-Ala-D-Ala carboxypeptidase; KEGG: efa:EF2297 4.0e-41 vanYB; D-alanyl-D-alanine carboxypeptidase K07260; COG: COG1876 D-alanyl-D-alanine carboxypeptidase; Psort location: CytoplasmicMembrane, score: 9.88.
    
 0.795
EDR96872.1
KEGG: chy:CHY_1563 9.3e-97 penicillin-binding protein, 1A family K05366; COG: COG0744 Membrane carboxypeptidase (penicillin-binding protein); Psort location: Extracellular, score: 9.55.
  
 
 0.753
EDR95902.1
Transglycosylase; KEGG: tte:TTE0314 2.6e-108 mrcA; Membrane carboxypeptidase (penicillin-binding protein) K05366; COG: COG0744 Membrane carboxypeptidase (penicillin-binding protein); Psort location: Extracellular, score: 9.55.
  
 
 0.753
EDR96119.1
KEGG: lwe:lwe2649 5.1e-18 Cof-like hydrolase K01564; COG: COG0561 Predicted hydrolases of the HAD superfamily; Psort location: Cytoplasmic, score: 8.87.
       0.736
ung
uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.
       0.736
EDR96118.1
Hypothetical protein; KEGG: spi:MGAS10750_Spy0175 5.9e-11 S-layer protein.
       0.723
EDR99170.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: tte:TTE1916 2.1e-76 ftsI4; Cell division protein FtsI/penicillin-binding protein 2 K03587; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.698
EDR99169.1
Penicillin-binding protein, transpeptidase domain protein; KEGG: tte:TTE1916 5.1e-89 ftsI4; Cell division protein FtsI/penicillin-binding protein 2 K03587; COG: COG0768 Cell division protein FtsI/penicillin-binding protein 2; Psort location: CytoplasmicMembrane, score: 9.82.
 
 
 0.681
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.