STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDR95803.1Efflux transporter, RND family, MFP subunit; KEGG: cal:orf19.4072 3.3e-09 HYR10; similar to cell surface flocculin K01186; COG: COG0845 Membrane-fusion protein; Psort location: Cellwall, score: 9.17; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (575 aa)    
Predicted Functional Partners:
EDR95801.1
Efflux ABC transporter, permease protein; KEGG: cch:Cag_0337 1.9e-57 ATPase K06020; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 10.00.
 
 
 0.998
EDR95802.1
ABC transporter, ATP-binding protein; KEGG: fal:FRAAL6466 6.8e-62 ABC-type transport systems, involved in lipoprotein release, ATPase components K06020; COG: COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Psort location: CytoplasmicMembrane, score: 9.49.
 
 0.990
EDR96843.1
RND transporter, HAE1/HME family, permease protein; KEGG: eci:UTI89_C2351 4.5e-66 yegO; hypothetical protein YegO K07789; COG: COG0841 Cation/multidrug efflux pump; Psort location: CytoplasmicMembrane, score: 10.00; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
 0.970
EDR97991.1
Efflux ABC transporter, permease protein; COG: COG0577 ABC-type antimicrobial peptide transport system, permease component; Psort location: CytoplasmicMembrane, score: 9.99.
  
 
 0.892
EDR99289.1
Hypothetical protein; COG: NOG21932 non supervised orthologous group.
  
 0.884
EDR96582.1
Hypothetical protein; KEGG: cal:orf19.4072 1.1e-16 HYR10; similar to cell surface flocculin K01186; COG: COG5295 Autotransporter adhesin; Psort location: Cellwall, score: 9.18.
  
 0.884
nifJ
Pyruvate synthase; KEGG: cno:NT01CX_1854 0. nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase K00168; COG: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.
   
 
 0.805
EDR97275.1
Hypothetical protein; Psort location: CytoplasmicMembrane, score: 10.00.
  
 
 0.804
EDR98962.1
PTS system sucrose-specific IIBC component; KEGG: lsa:LSA1792 7.5e-143 scrA; sucrose-specific phosphotransferase system, enzyme IIBCA K02808:K02809:K02810; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.793
EDR97267.1
PTS system, beta-glucoside-specific, IIABC component; KEGG: bld:BLi04200 1.0e-138 close homolog to BglP PTS enzyme IIBCA component; RBL02058 K02755:K02756:K02757; COG: COG2190 Phosphotransferase system IIA components; Psort location: CytoplasmicMembrane, score: 10.00.
     
 0.793
Your Current Organism:
Anaerostipes caccae
NCBI taxonomy Id: 411490
Other names: A. caccae DSM 14662, Anaerostipes caccae DSM 14662
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