Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDQ33492.1 | EDQ34167.1 | HPDFL43_09657 | HPDFL43_14257 | PAS domain S-box. | Methyl-accepting chemotaxis protein. | 0.852 |
EDQ33492.1 | EDQ34563.1 | HPDFL43_09657 | HPDFL43_00160 | PAS domain S-box. | Response regulator; Containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.990 |
EDQ33492.1 | EDQ34564.1 | HPDFL43_09657 | HPDFL43_00165 | PAS domain S-box. | Chemotaxis protein histidine kinase. | 0.992 |
EDQ33492.1 | EDQ34565.1 | HPDFL43_09657 | HPDFL43_00170 | PAS domain S-box. | Chemotaxis signal transduction protein. | 0.864 |
EDQ33492.1 | EDQ34566.1 | HPDFL43_09657 | HPDFL43_00175 | PAS domain S-box. | Methylase of chemotaxis methyl-accepting protein; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.865 |
EDQ33492.1 | EDQ34568.1 | HPDFL43_09657 | HPDFL43_00185 | PAS domain S-box. | Response regulator; Containing a CheY-like receiver domain and an HD-GYP domain protein. | 0.779 |
EDQ33492.1 | EDQ35032.1 | HPDFL43_09657 | HPDFL43_02505 | PAS domain S-box. | Chemotaxis signal transduction protein. | 0.864 |
EDQ33492.1 | EDQ35633.1 | HPDFL43_09657 | HPDFL43_20602 | PAS domain S-box. | Chemotaxis signal transduction protein. | 0.864 |
EDQ33492.1 | cheB | HPDFL43_09657 | HPDFL43_00180 | PAS domain S-box. | Chemotaxis response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.878 |
EDQ33492.1 | cheD | HPDFL43_09657 | HPDFL43_00190 | PAS domain S-box. | Chemotaxis protein, stimulates methylation of MCP protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.730 |
EDQ34167.1 | EDQ33492.1 | HPDFL43_14257 | HPDFL43_09657 | Methyl-accepting chemotaxis protein. | PAS domain S-box. | 0.852 |
EDQ34167.1 | EDQ34563.1 | HPDFL43_14257 | HPDFL43_00160 | Methyl-accepting chemotaxis protein. | Response regulator; Containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains. | 0.953 |
EDQ34167.1 | EDQ34564.1 | HPDFL43_14257 | HPDFL43_00165 | Methyl-accepting chemotaxis protein. | Chemotaxis protein histidine kinase. | 0.994 |
EDQ34167.1 | EDQ34565.1 | HPDFL43_14257 | HPDFL43_00170 | Methyl-accepting chemotaxis protein. | Chemotaxis signal transduction protein. | 0.980 |
EDQ34167.1 | EDQ34566.1 | HPDFL43_14257 | HPDFL43_00175 | Methyl-accepting chemotaxis protein. | Methylase of chemotaxis methyl-accepting protein; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP. | 0.968 |
EDQ34167.1 | EDQ34568.1 | HPDFL43_14257 | HPDFL43_00185 | Methyl-accepting chemotaxis protein. | Response regulator; Containing a CheY-like receiver domain and an HD-GYP domain protein. | 0.890 |
EDQ34167.1 | EDQ35032.1 | HPDFL43_14257 | HPDFL43_02505 | Methyl-accepting chemotaxis protein. | Chemotaxis signal transduction protein. | 0.981 |
EDQ34167.1 | EDQ35633.1 | HPDFL43_14257 | HPDFL43_20602 | Methyl-accepting chemotaxis protein. | Chemotaxis signal transduction protein. | 0.981 |
EDQ34167.1 | cheB | HPDFL43_14257 | HPDFL43_00180 | Methyl-accepting chemotaxis protein. | Chemotaxis response regulator; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. | 0.966 |
EDQ34167.1 | cheD | HPDFL43_14257 | HPDFL43_00190 | Methyl-accepting chemotaxis protein. | Chemotaxis protein, stimulates methylation of MCP protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.947 |
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