Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDQ34599.1 | EDQ34686.2 | HPDFL43_00340 | HPDFL43_00775 | Hypothetical protein. | Cellulose synthase catalytic subunit (UDP-forming). | 0.671 |
EDQ34599.1 | EDQ34688.1 | HPDFL43_00340 | HPDFL43_00785 | Hypothetical protein. | Hypothetical protein. | 0.532 |
EDQ34599.1 | EDQ34689.2 | HPDFL43_00340 | HPDFL43_00790 | Hypothetical protein. | Hypothetical protein. | 0.592 |
EDQ34686.2 | EDQ34599.1 | HPDFL43_00775 | HPDFL43_00340 | Cellulose synthase catalytic subunit (UDP-forming). | Hypothetical protein. | 0.671 |
EDQ34686.2 | EDQ34687.1 | HPDFL43_00775 | HPDFL43_00780 | Cellulose synthase catalytic subunit (UDP-forming). | Bacterial cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | 0.998 |
EDQ34686.2 | EDQ34688.1 | HPDFL43_00775 | HPDFL43_00785 | Cellulose synthase catalytic subunit (UDP-forming). | Hypothetical protein. | 0.986 |
EDQ34686.2 | EDQ34689.2 | HPDFL43_00775 | HPDFL43_00790 | Cellulose synthase catalytic subunit (UDP-forming). | Hypothetical protein. | 0.793 |
EDQ34687.1 | EDQ34686.2 | HPDFL43_00780 | HPDFL43_00775 | Bacterial cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | Cellulose synthase catalytic subunit (UDP-forming). | 0.998 |
EDQ34687.1 | EDQ34688.1 | HPDFL43_00780 | HPDFL43_00785 | Bacterial cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | Hypothetical protein. | 0.957 |
EDQ34687.1 | EDQ34689.2 | HPDFL43_00780 | HPDFL43_00790 | Bacterial cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | Hypothetical protein. | 0.794 |
EDQ34688.1 | EDQ34599.1 | HPDFL43_00785 | HPDFL43_00340 | Hypothetical protein. | Hypothetical protein. | 0.532 |
EDQ34688.1 | EDQ34686.2 | HPDFL43_00785 | HPDFL43_00775 | Hypothetical protein. | Cellulose synthase catalytic subunit (UDP-forming). | 0.986 |
EDQ34688.1 | EDQ34687.1 | HPDFL43_00785 | HPDFL43_00780 | Hypothetical protein. | Bacterial cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | 0.957 |
EDQ34688.1 | EDQ34689.2 | HPDFL43_00785 | HPDFL43_00790 | Hypothetical protein. | Hypothetical protein. | 0.794 |
EDQ34689.2 | EDQ34599.1 | HPDFL43_00790 | HPDFL43_00340 | Hypothetical protein. | Hypothetical protein. | 0.592 |
EDQ34689.2 | EDQ34686.2 | HPDFL43_00790 | HPDFL43_00775 | Hypothetical protein. | Cellulose synthase catalytic subunit (UDP-forming). | 0.793 |
EDQ34689.2 | EDQ34687.1 | HPDFL43_00790 | HPDFL43_00780 | Hypothetical protein. | Bacterial cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family. | 0.794 |
EDQ34689.2 | EDQ34688.1 | HPDFL43_00790 | HPDFL43_00785 | Hypothetical protein. | Hypothetical protein. | 0.794 |
EDQ34689.2 | EDQ35294.2 | HPDFL43_00790 | HPDFL43_18907 | Hypothetical protein. | Folylpolyglutamate synthase/dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family. | 0.570 |
EDQ34689.2 | EDQ35491.1 | HPDFL43_00790 | HPDFL43_19892 | Hypothetical protein. | Putative periplasmic or secreted protein. | 0.478 |
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