STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ34914.1Pirin-related protein; Belongs to the pirin family. (288 aa)    
Predicted Functional Partners:
EDQ34913.1
Amidase; Related to nicotinamidase.
 
    0.738
EDQ33522.1
Hypothetical protein.
 
  
 0.713
EDQ34340.1
Hypothetical protein.
 
  
 0.694
EDQ34912.2
Hypothetical protein.
       0.648
EDQ34915.2
Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
 
     0.610
EDQ34911.1
Putative nucleoside-diphosphate-sugar epimerase.
       0.481
Your Current Organism:
Hoeflea phototrophica
NCBI taxonomy Id: 411684
Other names: Ahrensia sp. DFL-43, H. phototrophica DFL-43, Hoeflea phototrophica DFL-43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.