STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ34949.1Glutamate--cysteine ligase, plant type; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily. (457 aa)    
Predicted Functional Partners:
gshB
Glutathione synthetase, prokaryotic; Belongs to the prokaryotic GSH synthase family.
    
 0.843
EDQ34149.2
Delta-1-pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
   
 
  0.648
EDQ35513.1
Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase).
    
 0.611
EDQ33027.1
Carboxylate-amine ligase, YbdK family; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
    
  0.596
EDQ35227.2
NAD-specific glutamate dehydrogenase.
    
  0.596
EDQ35034.1
Hypothetical protein.
    
  0.577
EDQ32049.2
Hypothetical protein.
    
  0.557
EDQ34950.1
RNA methyltransferase, RsmE family; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.
       0.523
EDQ34948.1
Hypothetical protein.
       0.515
EDQ33615.1
dTDP-4-dehydrorhamnose 3,5-epimerase.
  
     0.503
Your Current Organism:
Hoeflea phototrophica
NCBI taxonomy Id: 411684
Other names: Ahrensia sp. DFL-43, H. phototrophica DFL-43, Hoeflea phototrophica DFL-43
Server load: medium (44%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.