STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ32017.1ABC-type bacteriocin/lantibiotic exporter. (557 aa)    
Predicted Functional Partners:
EDQ32019.1
Type I secretion membrane fusion protein, HlyD family.
 0.999
EDQ33366.1
Siderophore-interacting protein.
   
  0.975
EDQ32016.2
RTX toxin; Including related Ca2+-binding protein.
 
  
 0.842
EDQ32018.1
ABC-type bacteriocin/lantibiotic exporter.
 
    
0.836
EDQ35100.2
Outer membrane protein.
  
 
 0.765
EDQ32594.1
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.736
EDQ34074.1
ABC exporter membrane fusion protein, DevB family.
  
 0.736
EDQ31735.2
RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.736
EDQ33349.1
Type I secretion outer membrane protein, TolC family.
 
 
 0.723
EDQ34849.2
ABC-type bacteriocin/lantibiotic exporter.
 
 
0.713
Your Current Organism:
Hoeflea phototrophica
NCBI taxonomy Id: 411684
Other names: Ahrensia sp. DFL-43, H. phototrophica DFL-43, Hoeflea phototrophica DFL-43
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