STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ33789.1PAS domain S-box. (795 aa)    
Predicted Functional Partners:
EDQ34016.1
CheY-like receiver.
 0.996
EDQ35001.1
PAS domain S-box.
 0.995
EDQ33269.1
Signal transduction histidine kinase.
 
0.995
EDQ32052.1
PAS domain S-box.
 
0.994
EDQ31934.2
PAS domain S-box.
 
0.993
EDQ33492.1
PAS domain S-box.
 
 0.991
EDQ35609.1
Signal transduction histidine kinase.
 
0.990
EDQ31933.1
Response regulator; Containing a CheY-like receiver domain and an HTH DNA-binding domain protein.
 
 0.989
EDQ32779.1
Pyruvate/2-oxoglutarate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
    
 0.987
EDQ34017.1
Diguanylate cyclase (GGDEF) domain protein.
 0.979
Your Current Organism:
Hoeflea phototrophica
NCBI taxonomy Id: 411684
Other names: Ahrensia sp. DFL-43, H. phototrophica DFL-43, Hoeflea phototrophica DFL-43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.