Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDQ32583.1 | EDQ33530.1 | HPDFL43_03531 | HPDFL43_09847 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | Glutathione-disulfide reductase, plant; Maintains high levels of reduced glutathione. | 0.724 |
EDQ32583.1 | EDQ33834.1 | HPDFL43_03531 | HPDFL43_05255 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | Glutathione S-transferase. | 0.496 |
EDQ32583.1 | gshB | HPDFL43_03531 | HPDFL43_20387 | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | Glutathione synthetase, prokaryotic; Belongs to the prokaryotic GSH synthase family. | 0.633 |
EDQ32773.1 | EDQ32991.1 | HPDFL43_07489 | HPDFL43_08579 | Hypothetical protein. | Hypothetical protein. | 0.647 |
EDQ32773.1 | EDQ33834.1 | HPDFL43_07489 | HPDFL43_05255 | Hypothetical protein. | Glutathione S-transferase. | 0.501 |
EDQ32991.1 | EDQ32773.1 | HPDFL43_08579 | HPDFL43_07489 | Hypothetical protein. | Hypothetical protein. | 0.647 |
EDQ32991.1 | EDQ33834.1 | HPDFL43_08579 | HPDFL43_05255 | Hypothetical protein. | Glutathione S-transferase. | 0.496 |
EDQ32991.1 | lysS | HPDFL43_08579 | HPDFL43_16037 | Hypothetical protein. | Lysyl-tRNA synthetase (class II); Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.404 |
EDQ33530.1 | EDQ32583.1 | HPDFL43_09847 | HPDFL43_03531 | Glutathione-disulfide reductase, plant; Maintains high levels of reduced glutathione. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.724 |
EDQ33530.1 | EDQ33834.1 | HPDFL43_09847 | HPDFL43_05255 | Glutathione-disulfide reductase, plant; Maintains high levels of reduced glutathione. | Glutathione S-transferase. | 0.526 |
EDQ33530.1 | gshB | HPDFL43_09847 | HPDFL43_20387 | Glutathione-disulfide reductase, plant; Maintains high levels of reduced glutathione. | Glutathione synthetase, prokaryotic; Belongs to the prokaryotic GSH synthase family. | 0.772 |
EDQ33834.1 | EDQ32583.1 | HPDFL43_05255 | HPDFL43_03531 | Glutathione S-transferase. | Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily. | 0.496 |
EDQ33834.1 | EDQ32773.1 | HPDFL43_05255 | HPDFL43_07489 | Glutathione S-transferase. | Hypothetical protein. | 0.501 |
EDQ33834.1 | EDQ32991.1 | HPDFL43_05255 | HPDFL43_08579 | Glutathione S-transferase. | Hypothetical protein. | 0.496 |
EDQ33834.1 | EDQ33530.1 | HPDFL43_05255 | HPDFL43_09847 | Glutathione S-transferase. | Glutathione-disulfide reductase, plant; Maintains high levels of reduced glutathione. | 0.526 |
EDQ33834.1 | gshB | HPDFL43_05255 | HPDFL43_20387 | Glutathione S-transferase. | Glutathione synthetase, prokaryotic; Belongs to the prokaryotic GSH synthase family. | 0.499 |
EDQ33834.1 | lysS | HPDFL43_05255 | HPDFL43_16037 | Glutathione S-transferase. | Lysyl-tRNA synthetase (class II); Belongs to the class-II aminoacyl-tRNA synthetase family. | 0.551 |
EDQ33834.1 | rpoA | HPDFL43_05255 | HPDFL43_06757 | Glutathione S-transferase. | DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.732 |
EDQ33834.1 | rpoB | HPDFL43_05255 | HPDFL43_06565 | Glutathione S-transferase. | DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.570 |
EDQ33834.1 | rpoC | HPDFL43_05255 | HPDFL43_06570 | Glutathione S-transferase. | DNA-directed RNA polymerase, beta'' subunit, predominant form; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.599 |
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