STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ33913.1Hypothetical protein. (541 aa)    
Predicted Functional Partners:
EDQ35413.1
Flp pilus assembly protein, ATPase CpaE.
 
  
 0.908
EDQ35410.1
Flp pilus assembly protein CpaB.
 
  
 0.886
EDQ35415.1
Flp pilus assembly protein TadB.
 
  
 0.856
EDQ35416.1
Flp pilus assembly protein TadC.
 
    0.847
EDQ35409.2
Flp pilus assembly protein, protease CpaA.
 
  
 0.773
EDQ35414.1
Flp pilus assembly protein, ATPase CpaF.
 
  
 0.755
EDQ35411.2
Flp pilus assembly protein, secretin CpaC; Belongs to the bacterial secretin family.
 
  
 0.751
EDQ35405.1
Hypothetical protein.
 
  
 0.749
EDQ35403.1
TadE-like protein.
 
   
 0.748
EDQ35406.2
Flp pilus assembly protein, pilin Flp.
 
  
 0.736
Your Current Organism:
Hoeflea phototrophica
NCBI taxonomy Id: 411684
Other names: Ahrensia sp. DFL-43, H. phototrophica DFL-43, Hoeflea phototrophica DFL-43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.