STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ34078.1Glycine/D-amino acid oxidase (deaminating). (375 aa)    
Predicted Functional Partners:
EDQ34470.1
Sarcosine oxidase, alpha subunit family, heterotetrameric form.
  
 0.980
EDQ31546.1
Sarcosine oxidase, alpha subunit family, heterotetrameric form.
  
 0.980
EDQ34079.1
Putative translation initiation inhibitor, yjgF family.
  
    0.794
EDQ34449.2
Glutamate synthase domain 2.
    
 0.732
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
 0.682
EDQ34077.2
Hypothetical protein.
       0.639
EDQ31567.1
Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase.
     
 0.599
EDQ34471.1
Sarcosine oxidase, delta subunit family, heterotetrameric form.
  
 0.593
EDQ32101.1
Iron-binding zinc finger CDGSH type.
    
  0.554
EDQ31547.1
Sarcosine oxidase delta subunit.
  
  0.554
Your Current Organism:
Hoeflea phototrophica
NCBI taxonomy Id: 411684
Other names: Ahrensia sp. DFL-43, H. phototrophica DFL-43, Hoeflea phototrophica DFL-43
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.