Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDQ31457.1 | EDQ32750.2 | HPDFL43_12428 | HPDFL43_07374 | Acyl carrier protein. | Dioxygenase; Related to 2-nitropropane dioxygenase. | 0.622 |
EDQ31457.1 | EDQ32779.1 | HPDFL43_12428 | HPDFL43_07519 | Acyl carrier protein. | Pyruvate/2-oxoglutarate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | 0.751 |
EDQ31457.1 | EDQ33810.2 | HPDFL43_12428 | HPDFL43_05135 | Acyl carrier protein. | Malonyl CoA-acyl carrier protein transacylase. | 0.995 |
EDQ31457.1 | gcvH | HPDFL43_12428 | HPDFL43_00800 | Acyl carrier protein. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.782 |
EDQ31457.1 | lipB | HPDFL43_12428 | HPDFL43_06867 | Acyl carrier protein. | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.827 |
EDQ32750.2 | EDQ31457.1 | HPDFL43_07374 | HPDFL43_12428 | Dioxygenase; Related to 2-nitropropane dioxygenase. | Acyl carrier protein. | 0.622 |
EDQ32750.2 | EDQ33810.2 | HPDFL43_07374 | HPDFL43_05135 | Dioxygenase; Related to 2-nitropropane dioxygenase. | Malonyl CoA-acyl carrier protein transacylase. | 0.831 |
EDQ32750.2 | EDQ35213.1 | HPDFL43_07374 | HPDFL43_18502 | Dioxygenase; Related to 2-nitropropane dioxygenase. | Acyl carrier protein. | 0.622 |
EDQ32750.2 | acpP | HPDFL43_07374 | HPDFL43_05145 | Dioxygenase; Related to 2-nitropropane dioxygenase. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.642 |
EDQ32750.2 | lipB | HPDFL43_07374 | HPDFL43_06867 | Dioxygenase; Related to 2-nitropropane dioxygenase. | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.616 |
EDQ32779.1 | EDQ31457.1 | HPDFL43_07519 | HPDFL43_12428 | Pyruvate/2-oxoglutarate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Acyl carrier protein. | 0.751 |
EDQ32779.1 | EDQ33810.2 | HPDFL43_07519 | HPDFL43_05135 | Pyruvate/2-oxoglutarate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Malonyl CoA-acyl carrier protein transacylase. | 0.804 |
EDQ32779.1 | EDQ35213.1 | HPDFL43_07519 | HPDFL43_18502 | Pyruvate/2-oxoglutarate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Acyl carrier protein. | 0.751 |
EDQ32779.1 | acpP | HPDFL43_07519 | HPDFL43_05145 | Pyruvate/2-oxoglutarate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.751 |
EDQ32779.1 | gcvH | HPDFL43_07519 | HPDFL43_00800 | Pyruvate/2-oxoglutarate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.915 |
EDQ32779.1 | gcvP | HPDFL43_07519 | HPDFL43_00795 | Pyruvate/2-oxoglutarate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.926 |
EDQ32779.1 | lipA | HPDFL43_07519 | HPDFL43_07559 | Pyruvate/2-oxoglutarate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Lipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. | 0.762 |
EDQ32779.1 | lipB | HPDFL43_07519 | HPDFL43_06867 | Pyruvate/2-oxoglutarate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. | Lipoate-protein ligase B; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate. | 0.679 |
EDQ33810.2 | EDQ31457.1 | HPDFL43_05135 | HPDFL43_12428 | Malonyl CoA-acyl carrier protein transacylase. | Acyl carrier protein. | 0.995 |
EDQ33810.2 | EDQ32750.2 | HPDFL43_05135 | HPDFL43_07374 | Malonyl CoA-acyl carrier protein transacylase. | Dioxygenase; Related to 2-nitropropane dioxygenase. | 0.831 |
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