STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ32845.1TRAP-type C4-dicarboxylate transport system, small permease component. (168 aa)    
Predicted Functional Partners:
EDQ32844.2
TRAP transporter, DctM subunit.
 
     0.925
EDQ32846.1
TRAP-type C4-dicarboxylate transport system, periplasmic component.
 
    0.924
EDQ32849.1
Transcriptional regulator.
 
     0.841
EDQ32850.1
Uncharacterized protein, 4-oxalocrotonate tautomerase-like protein.
 
     0.838
EDQ32855.1
Succinate dehydrogenase/fumarate reductase, flavoprotein subunit.
 
    0.819
EDQ32853.1
Amidase; Related to nicotinamidase.
 
     0.806
EDQ35718.2
TRAP-type C4-dicarboxylate transport system, small permease component.
  
  
  0.746
EDQ32854.1
PEP phosphonomutase.
 
     0.697
EDQ32851.1
N-methylhydantoinase B/acetone carboxylase, alpha subunit.
 
     0.683
EDQ32852.2
N-methylhydantoinase A/acetone carboxylase, beta subunit.
 
     0.633
Your Current Organism:
Hoeflea phototrophica
NCBI taxonomy Id: 411684
Other names: Ahrensia sp. DFL-43, H. phototrophica DFL-43, Hoeflea phototrophica DFL-43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.