STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ31626.1Phenylacetate degradation probable enoyl-CoA hydratase paaB. (263 aa)    
Predicted Functional Partners:
EDQ32052.1
PAS domain S-box.
    
 0.980
EDQ33269.1
Signal transduction histidine kinase.
    
 0.980
EDQ35609.1
Signal transduction histidine kinase.
    
  0.973
EDQ33158.2
3-hydroxyacyl-CoA dehydrogenase.
 0.966
EDQ31639.1
phenylacetate-CoA oxygenase, PaaG subunit.
 
 
 0.958
EDQ31642.2
phenylacetate-CoA oxygenase, PaaJ subunit.
 
 
 0.958
EDQ31641.1
phenylacetate-CoA oxygenase, PaaI subunit.
 
 
 0.952
EDQ31628.1
Phenylacetic acid degradation protein paaN.
 
 0.940
EDQ31640.1
phenylacetate-CoA oxygenase, PaaH subunit.
 
 
 0.926
EDQ31625.1
Phenylacetic acid degradation protein PaaD.
 
 
 0.909
Your Current Organism:
Hoeflea phototrophica
NCBI taxonomy Id: 411684
Other names: Ahrensia sp. DFL-43, H. phototrophica DFL-43, Hoeflea phototrophica DFL-43
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