Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDQ31625.1 | EDQ31626.1 | HPDFL43_11336 | HPDFL43_11341 | Phenylacetic acid degradation protein PaaD. | Phenylacetate degradation probable enoyl-CoA hydratase paaB. | 0.909 |
EDQ31625.1 | EDQ31628.1 | HPDFL43_11336 | HPDFL43_11351 | Phenylacetic acid degradation protein PaaD. | Phenylacetic acid degradation protein paaN. | 0.910 |
EDQ31625.1 | EDQ31639.1 | HPDFL43_11336 | HPDFL43_11406 | Phenylacetic acid degradation protein PaaD. | phenylacetate-CoA oxygenase, PaaG subunit. | 0.935 |
EDQ31625.1 | EDQ31640.1 | HPDFL43_11336 | HPDFL43_11411 | Phenylacetic acid degradation protein PaaD. | phenylacetate-CoA oxygenase, PaaH subunit. | 0.942 |
EDQ31625.1 | EDQ31641.1 | HPDFL43_11336 | HPDFL43_11416 | Phenylacetic acid degradation protein PaaD. | phenylacetate-CoA oxygenase, PaaI subunit. | 0.947 |
EDQ31625.1 | EDQ31642.2 | HPDFL43_11336 | HPDFL43_11421 | Phenylacetic acid degradation protein PaaD. | phenylacetate-CoA oxygenase, PaaJ subunit. | 0.937 |
EDQ31625.1 | EDQ33158.2 | HPDFL43_11336 | HPDFL43_16821 | Phenylacetic acid degradation protein PaaD. | 3-hydroxyacyl-CoA dehydrogenase. | 0.412 |
EDQ31626.1 | EDQ31625.1 | HPDFL43_11341 | HPDFL43_11336 | Phenylacetate degradation probable enoyl-CoA hydratase paaB. | Phenylacetic acid degradation protein PaaD. | 0.909 |
EDQ31626.1 | EDQ31628.1 | HPDFL43_11341 | HPDFL43_11351 | Phenylacetate degradation probable enoyl-CoA hydratase paaB. | Phenylacetic acid degradation protein paaN. | 0.940 |
EDQ31626.1 | EDQ31639.1 | HPDFL43_11341 | HPDFL43_11406 | Phenylacetate degradation probable enoyl-CoA hydratase paaB. | phenylacetate-CoA oxygenase, PaaG subunit. | 0.958 |
EDQ31626.1 | EDQ31640.1 | HPDFL43_11341 | HPDFL43_11411 | Phenylacetate degradation probable enoyl-CoA hydratase paaB. | phenylacetate-CoA oxygenase, PaaH subunit. | 0.926 |
EDQ31626.1 | EDQ31641.1 | HPDFL43_11341 | HPDFL43_11416 | Phenylacetate degradation probable enoyl-CoA hydratase paaB. | phenylacetate-CoA oxygenase, PaaI subunit. | 0.952 |
EDQ31626.1 | EDQ31642.2 | HPDFL43_11341 | HPDFL43_11421 | Phenylacetate degradation probable enoyl-CoA hydratase paaB. | phenylacetate-CoA oxygenase, PaaJ subunit. | 0.958 |
EDQ31626.1 | EDQ32052.1 | HPDFL43_11341 | HPDFL43_03044 | Phenylacetate degradation probable enoyl-CoA hydratase paaB. | PAS domain S-box. | 0.980 |
EDQ31626.1 | EDQ33158.2 | HPDFL43_11341 | HPDFL43_16821 | Phenylacetate degradation probable enoyl-CoA hydratase paaB. | 3-hydroxyacyl-CoA dehydrogenase. | 0.966 |
EDQ31626.1 | EDQ33269.1 | HPDFL43_11341 | HPDFL43_17376 | Phenylacetate degradation probable enoyl-CoA hydratase paaB. | Signal transduction histidine kinase. | 0.980 |
EDQ31626.1 | EDQ35609.1 | HPDFL43_11341 | HPDFL43_20482 | Phenylacetate degradation probable enoyl-CoA hydratase paaB. | Signal transduction histidine kinase. | 0.973 |
EDQ31628.1 | EDQ31625.1 | HPDFL43_11351 | HPDFL43_11336 | Phenylacetic acid degradation protein paaN. | Phenylacetic acid degradation protein PaaD. | 0.910 |
EDQ31628.1 | EDQ31626.1 | HPDFL43_11351 | HPDFL43_11341 | Phenylacetic acid degradation protein paaN. | Phenylacetate degradation probable enoyl-CoA hydratase paaB. | 0.940 |
EDQ31628.1 | EDQ31639.1 | HPDFL43_11351 | HPDFL43_11406 | Phenylacetic acid degradation protein paaN. | phenylacetate-CoA oxygenase, PaaG subunit. | 0.917 |
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