STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ32522.1Sugar kinase, ribokinase family. (296 aa)    
Predicted Functional Partners:
EDQ32521.1
Nucleoside-diphosphate-sugar epimerase.
       0.786
EDQ35470.2
Mannose-1-phosphate guanylyltransferase.
    
 0.727
EDQ34513.1
Entner-Doudoroff aldolase.
 
 
 0.717
uxuA
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
  
 0.706
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
  
 
 0.704
guaB
Inosine-5''-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
     
 0.656
EDQ34729.2
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
  
 0.634
EDQ32526.1
Including related Zn-dependent dehydrogenase.
 
 
  0.634
EDQ33549.1
Putative enzyme involved in inositol metabolism.
  
 
 0.621
EDQ34933.2
2-keto-3-deoxy-6-phosphogluconate aldolase.
 
 
 0.616
Your Current Organism:
Hoeflea phototrophica
NCBI taxonomy Id: 411684
Other names: Ahrensia sp. DFL-43, H. phototrophica DFL-43, Hoeflea phototrophica DFL-43
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