Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDQ31756.2 | EDQ31934.2 | HPDFL43_21634 | HPDFL43_13255 | Putative peptidoglycan binding domain/Sel1 repeat protein. | PAS domain S-box. | 0.746 |
EDQ31756.2 | EDQ32052.1 | HPDFL43_21634 | HPDFL43_03044 | Putative peptidoglycan binding domain/Sel1 repeat protein. | PAS domain S-box. | 0.799 |
EDQ31756.2 | EDQ32586.1 | HPDFL43_21634 | HPDFL43_03546 | Putative peptidoglycan binding domain/Sel1 repeat protein. | PAS domain S-box/diguanylate cyclase (GGDEF) domain protein. | 0.721 |
EDQ31756.2 | EDQ33269.1 | HPDFL43_21634 | HPDFL43_17376 | Putative peptidoglycan binding domain/Sel1 repeat protein. | Signal transduction histidine kinase. | 0.799 |
EDQ31756.2 | EDQ33492.1 | HPDFL43_21634 | HPDFL43_09657 | Putative peptidoglycan binding domain/Sel1 repeat protein. | PAS domain S-box. | 0.788 |
EDQ31756.2 | EDQ33789.1 | HPDFL43_21634 | HPDFL43_05030 | Putative peptidoglycan binding domain/Sel1 repeat protein. | PAS domain S-box. | 0.738 |
EDQ31756.2 | EDQ34117.2 | HPDFL43_21634 | HPDFL43_14007 | Putative peptidoglycan binding domain/Sel1 repeat protein. | Putative phosphohydrolase. | 0.743 |
EDQ31934.2 | EDQ31756.2 | HPDFL43_13255 | HPDFL43_21634 | PAS domain S-box. | Putative peptidoglycan binding domain/Sel1 repeat protein. | 0.746 |
EDQ31934.2 | EDQ32052.1 | HPDFL43_13255 | HPDFL43_03044 | PAS domain S-box. | PAS domain S-box. | 0.997 |
EDQ31934.2 | EDQ32586.1 | HPDFL43_13255 | HPDFL43_03546 | PAS domain S-box. | PAS domain S-box/diguanylate cyclase (GGDEF) domain protein. | 0.938 |
EDQ31934.2 | EDQ33269.1 | HPDFL43_13255 | HPDFL43_17376 | PAS domain S-box. | Signal transduction histidine kinase. | 0.997 |
EDQ31934.2 | EDQ33492.1 | HPDFL43_13255 | HPDFL43_09657 | PAS domain S-box. | PAS domain S-box. | 0.996 |
EDQ31934.2 | EDQ33789.1 | HPDFL43_13255 | HPDFL43_05030 | PAS domain S-box. | PAS domain S-box. | 0.993 |
EDQ31934.2 | EDQ34117.2 | HPDFL43_13255 | HPDFL43_14007 | PAS domain S-box. | Putative phosphohydrolase. | 0.699 |
EDQ32052.1 | EDQ31756.2 | HPDFL43_03044 | HPDFL43_21634 | PAS domain S-box. | Putative peptidoglycan binding domain/Sel1 repeat protein. | 0.799 |
EDQ32052.1 | EDQ31934.2 | HPDFL43_03044 | HPDFL43_13255 | PAS domain S-box. | PAS domain S-box. | 0.997 |
EDQ32052.1 | EDQ32586.1 | HPDFL43_03044 | HPDFL43_03546 | PAS domain S-box. | PAS domain S-box/diguanylate cyclase (GGDEF) domain protein. | 0.996 |
EDQ32052.1 | EDQ33269.1 | HPDFL43_03044 | HPDFL43_17376 | PAS domain S-box. | Signal transduction histidine kinase. | 0.996 |
EDQ32052.1 | EDQ33492.1 | HPDFL43_03044 | HPDFL43_09657 | PAS domain S-box. | PAS domain S-box. | 0.996 |
EDQ32052.1 | EDQ33789.1 | HPDFL43_03044 | HPDFL43_05030 | PAS domain S-box. | PAS domain S-box. | 0.994 |
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