STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ34152.1Hypothetical protein. (365 aa)    
Predicted Functional Partners:
EDQ34153.1
Hypothetical protein.
 
     0.850
EDQ34154.1
ATPase; Related to the helicase subunit of the Holliday junction resolvase.
 
     0.818
EDQ34155.2
Hypothetical protein.
       0.794
EDQ34665.1
Hypothetical protein.
  
     0.709
EDQ33503.1
Putative secreted Zn-dependent protease.
  
     0.701
EDQ31681.1
Hypothetical protein.
  
     0.679
EDQ33139.1
Hypothetical protein.
  
     0.654
EDQ35488.1
Hypothetical protein.
  
     0.651
EDQ34443.1
Hypothetical protein.
  
     0.649
EDQ32361.1
Putative extracellular nuclease.
  
     0.644
Your Current Organism:
Hoeflea phototrophica
NCBI taxonomy Id: 411684
Other names: Ahrensia sp. DFL-43, H. phototrophica DFL-43, Hoeflea phototrophica DFL-43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.