STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ34224.1Hypothetical protein. (73 aa)    
Predicted Functional Partners:
EDQ34225.1
Glycine/D-amino acid oxidase (deaminating).
       0.773
EDQ34222.1
ABC-type spermidine/putrescine transport system, permease component I.
       0.671
EDQ34223.1
ABC-type spermidine/putrescine transport system, permease component II.
       0.671
EDQ34221.1
ABC-type spermidine/putrescine transport system, ATPase component; Belongs to the ABC transporter superfamily.
       0.657
EDQ34220.1
Spermidine/putrescine-binding periplasmic protein.
       0.439
Your Current Organism:
Hoeflea phototrophica
NCBI taxonomy Id: 411684
Other names: Ahrensia sp. DFL-43, H. phototrophica DFL-43, Hoeflea phototrophica DFL-43
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.