STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ34484.1Dehydrogenase with different specificity; Related to short-chain alcohol dehydrogenase. (256 aa)    
Predicted Functional Partners:
EDQ34449.2
Glutamate synthase domain 2.
     
 0.693
EDQ34979.1
Short-chain dehydrogenase of various substrate specificity, 17beta-HSD-like-protein.
  
 
  0.677
EDQ31568.1
Short-chain dehydrogenase of various substrate specificity.
  
     0.659
lcdH
3-hydroxyacyl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
  
 0.649
EDQ32272.1
Flavodoxin reductase (ferredoxin-NADPH reductase) family 1.
   
 0.649
EDQ31643.1
Flavodoxin reductase (ferredoxin-NADPH reductase) family 1.
   
 0.649
EDQ32779.1
Pyruvate/2-oxoglutarate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.622
EDQ31954.1
Dehydrogenase with different specificity; Related to short-chain alcohol dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
  0.591
EDQ32744.2
Short-chain dehydrogenase of various substrate specificity.
   
 0.572
EDQ33568.1
Hexose kinase, 1-phosphofructokinase family; Belongs to the carbohydrate kinase PfkB family.
   
 
  0.549
Your Current Organism:
Hoeflea phototrophica
NCBI taxonomy Id: 411684
Other names: Ahrensia sp. DFL-43, H. phototrophica DFL-43, Hoeflea phototrophica DFL-43
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