STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ35472.1Dihydrodipicolinate synthase/N-acetylneuraminate lyase; Belongs to the DapA family. (312 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
 
 
 0.853
EDQ35703.1
Putative metal-dependent hydrolase of the TIM-barrel fold protein.
  
  
 0.821
EDQ34515.1
Glycine/D-amino acid oxidase (deaminating).
 
  
  0.782
asd
Aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
  
 
 0.762
EDQ35470.2
Mannose-1-phosphate guanylyltransferase.
    
  0.738
EDQ35113.1
Monofunctional chorismate mutase, alpha proteobacterial type.
  
  
 0.694
EDQ33124.1
Aspartate kinase, monofunctional class; Belongs to the aspartokinase family.
 
 
 0.693
gatC
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
  
  
 0.678
EDQ35471.2
Phosphomannomutase.
    
 0.666
EDQ33303.1
Homoserine dehydrogenase.
  
 
 0.664
Your Current Organism:
Hoeflea phototrophica
NCBI taxonomy Id: 411684
Other names: Ahrensia sp. DFL-43, H. phototrophica DFL-43, Hoeflea phototrophica DFL-43
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