STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ35654.1Signal transduction histidine kinase. (489 aa)    
Predicted Functional Partners:
EDQ32779.1
Pyruvate/2-oxoglutarate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.987
EDQ31934.2
PAS domain S-box.
 
 
 0.953
EDQ33004.1
PAS domain S-box.
 
 
0.905
EDQ35191.2
Response regulator; With CheY-like receiver domain and a winged-helix DNA-binding domain protein.
  
 0.873
EDQ35653.1
Pyruvate/2-oxoglutarate dehydrogenase complex; Dihydrolipoamide dehydrogenase (E3) component.
   
  0.853
EDQ35001.1
PAS domain S-box.
 
 
 0.847
EDQ31575.1
His Kinase A (phosphoacceptor) domain/Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.
  
 
 0.817
EDQ32052.1
PAS domain S-box.
 
 
 0.812
EDQ34016.1
CheY-like receiver.
  
 
 0.790
EDQ33269.1
Signal transduction histidine kinase.
 
 
0.777
Your Current Organism:
Hoeflea phototrophica
NCBI taxonomy Id: 411684
Other names: Ahrensia sp. DFL-43, H. phototrophica DFL-43, Hoeflea phototrophica DFL-43
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.