Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDQ32845.1 | EDQ35717.1 | HPDFL43_07849 | HPDFL43_21022 | TRAP-type C4-dicarboxylate transport system, small permease component. | TRAP-type C4-dicarboxylate transport system, periplasmic component. | 0.475 |
EDQ32845.1 | EDQ35718.2 | HPDFL43_07849 | HPDFL43_21027 | TRAP-type C4-dicarboxylate transport system, small permease component. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.746 |
EDQ32845.1 | EDQ35719.1 | HPDFL43_07849 | HPDFL43_21032 | TRAP-type C4-dicarboxylate transport system, small permease component. | TRAP transporter, DctM subunit. | 0.490 |
EDQ33213.2 | EDQ35716.1 | HPDFL43_17096 | HPDFL43_21017 | Altronate dehydratase. | Hypothetical protein. | 0.404 |
EDQ33213.2 | EDQ35717.1 | HPDFL43_17096 | HPDFL43_21022 | Altronate dehydratase. | TRAP-type C4-dicarboxylate transport system, periplasmic component. | 0.539 |
EDQ33213.2 | EDQ35718.2 | HPDFL43_17096 | HPDFL43_21027 | Altronate dehydratase. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.681 |
EDQ33213.2 | EDQ35719.1 | HPDFL43_17096 | HPDFL43_21032 | Altronate dehydratase. | TRAP transporter, DctM subunit. | 0.654 |
EDQ33213.2 | EDQ35721.1 | HPDFL43_17096 | HPDFL43_21042 | Altronate dehydratase. | Dehydrogenase with different specificity; Related to short-chain alcohol dehydrogenase. | 0.719 |
EDQ33213.2 | EDQ35722.1 | HPDFL43_17096 | HPDFL43_21047 | Altronate dehydratase. | Including related Zn-dependent dehydrogenase. | 0.623 |
EDQ33213.2 | EDQ35723.1 | HPDFL43_17096 | HPDFL43_21052 | Altronate dehydratase. | Altronate dehydratase. | 0.955 |
EDQ33213.2 | hisD-2 | HPDFL43_17096 | HPDFL43_21037 | Altronate dehydratase. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.622 |
EDQ35715.1 | EDQ35716.1 | HPDFL43_21012 | HPDFL43_21017 | Transcriptional regulator. | Hypothetical protein. | 0.541 |
EDQ35715.1 | EDQ35717.1 | HPDFL43_21012 | HPDFL43_21022 | Transcriptional regulator. | TRAP-type C4-dicarboxylate transport system, periplasmic component. | 0.709 |
EDQ35715.1 | EDQ35718.2 | HPDFL43_21012 | HPDFL43_21027 | Transcriptional regulator. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.540 |
EDQ35715.1 | EDQ35719.1 | HPDFL43_21012 | HPDFL43_21032 | Transcriptional regulator. | TRAP transporter, DctM subunit. | 0.473 |
EDQ35715.1 | EDQ35721.1 | HPDFL43_21012 | HPDFL43_21042 | Transcriptional regulator. | Dehydrogenase with different specificity; Related to short-chain alcohol dehydrogenase. | 0.527 |
EDQ35715.1 | EDQ35722.1 | HPDFL43_21012 | HPDFL43_21047 | Transcriptional regulator. | Including related Zn-dependent dehydrogenase. | 0.672 |
EDQ35715.1 | hisD-2 | HPDFL43_21012 | HPDFL43_21037 | Transcriptional regulator. | Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine. | 0.485 |
EDQ35716.1 | EDQ33213.2 | HPDFL43_21017 | HPDFL43_17096 | Hypothetical protein. | Altronate dehydratase. | 0.404 |
EDQ35716.1 | EDQ35715.1 | HPDFL43_21017 | HPDFL43_21012 | Hypothetical protein. | Transcriptional regulator. | 0.541 |
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