Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDQ31737.2 | EDQ31739.1 | HPDFL43_21539 | HPDFL43_21549 | Trk-type K+ transport system, membrane component; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. | Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.507 |
EDQ31737.2 | apaG | HPDFL43_21539 | HPDFL43_21544 | Trk-type K+ transport system, membrane component; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. | Uncharacterized protein affecting Mg2+/Co2+ transport. | 0.786 |
EDQ31739.1 | EDQ31737.2 | HPDFL43_21549 | HPDFL43_21539 | Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Trk-type K+ transport system, membrane component; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. | 0.507 |
EDQ31739.1 | apaG | HPDFL43_21549 | HPDFL43_21544 | Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | Uncharacterized protein affecting Mg2+/Co2+ transport. | 0.549 |
apaG | EDQ31737.2 | HPDFL43_21544 | HPDFL43_21539 | Uncharacterized protein affecting Mg2+/Co2+ transport. | Trk-type K+ transport system, membrane component; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family. | 0.786 |
apaG | EDQ31739.1 | HPDFL43_21544 | HPDFL43_21549 | Uncharacterized protein affecting Mg2+/Co2+ transport. | Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family. | 0.549 |
apaG | rsmA | HPDFL43_21544 | HPDFL43_05185 | Uncharacterized protein affecting Mg2+/Co2+ transport. | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | 0.867 |
rsmA | apaG | HPDFL43_05185 | HPDFL43_21544 | Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. | Uncharacterized protein affecting Mg2+/Co2+ transport. | 0.867 |