STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB12316.1Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily. (607 aa)    
Predicted Functional Partners:
SCB24673.1
Biotin transport system permease protein.
  
 0.884
SCB12309.1
Peptide/nickel transport system permease protein.
 
 
  0.869
SCB12302.1
Peptide/nickel transport system permease protein.
  
 
  0.816
SCB37857.1
Peptide/nickel transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 
0.805
SCB12297.1
Peptide/nickel transport system substrate-binding protein.
  
 
  0.758
SCB46953.1
Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
  0.639
SCB24680.1
Biotin transport system ATP-binding protein.
  
 
0.540
SCB10102.1
Microcin C transport system permease protein.
 
  
  0.501
SCB32899.1
Dipeptide transport system permease protein.
 
 
 
  0.431
SCB47221.1
Peptide/nickel transport system substrate-binding protein.
 
 
 0.425
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.