STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB16247.1OmpA family protein. (337 aa)    
Predicted Functional Partners:
SCB07026.1
Chemotaxis protein MotA.
  
 0.995
SCB16228.1
Hypothetical protein.
 
     0.954
SCB16235.1
Hypothetical protein.
 
     0.954
SCB16242.1
Hypothetical protein.
 
     0.954
SCB06968.1
Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
  
 
 0.873
SCB33306.1
Flagellar hook-associated protein 1 FlgK.
  
  
 0.822
SCB07005.1
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
  
  
 0.818
SCB07127.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
  
 0.796
SCB12445.1
Two-component system, chemotaxis family, sensor kinase CheA.
  
  
 0.796
SCB44685.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
   
   0.790
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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