STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB16298.1NAD(P)H dehydrogenase (quinone). (199 aa)    
Predicted Functional Partners:
SCB33781.1
LysM domain-containing protein.
  
  
 0.703
SCB16543.1
Sporulation related domain-containing protein.
   
    0.698
SCB22047.1
Starvation-inducible DNA-binding protein; Belongs to the Dps family.
  
  
 0.684
SCB45863.1
Multimeric flavodoxin WrbA.
  
  
 
0.646
SCB37470.1
Putative serine protein kinase, PrkA.
   
    0.604
SCB09162.1
Putative NADPH-quinone reductase (modulator of drug activity B).
    
 0.530
SCB35743.1
Putative NADPH-quinone reductase (modulator of drug activity B).
    
 0.530
SCB24726.1
DnaJ C terminal domain-containing protein.
   
  
 0.521
SCB16289.1
Molybdenum cofactor synthesis domain-containing protein.
       0.517
SCB31362.1
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
   
    0.467
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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