STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB17059.1Lysophospholipase L1. (213 aa)    
Predicted Functional Partners:
SCB20925.1
Filamentous hemagglutinin family N-terminal domain-containing protein.
   
 0.857
SCB28928.1
Filamentous hemagglutinin family N-terminal domain-containing protein.
   
 0.857
SCB34474.1
Filamentous hemagglutinin.
   
 0.857
SCB36365.1
Outer membrane autotransporter barrel domain-containing protein.
   
 0.857
SCB39806.1
Outer membrane autotransporter barrel domain-containing protein.
   
 0.857
SCB17055.1
Pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase); The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).
       0.739
SCB33341.1
Chemotaxis protein MotC.
    
  0.728
SCB37291.1
Hypothetical protein.
    
  0.728
SCB42645.1
Hypothetical protein.
    
  0.728
SCB47007.1
Putative Ig domain-containing protein.
    
  0.728
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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