STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB18134.1FAD dependent oxidoreductase. (260 aa)    
Predicted Functional Partners:
SCB18127.1
FAD dependent oxidoreductase.
     0.994
SCB23770.1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 0.975
SCB30622.1
Sarcosine oxidase subunit alpha.
  
 0.965
SCB46938.1
Sarcosine oxidase subunit alpha.
  
 0.965
SCB47957.1
Sarcosine oxidase subunit alpha.
  
 0.965
SCB18120.1
Histidine ammonia-lyase.
 
     0.800
SCB30631.1
Sarcosine oxidase subunit delta.
  
 0.780
SCB38456.1
Amino acid adenylation domain-containing protein.
  
 
 0.777
SCB18112.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
       0.773
SCB31849.1
Glutamate synthase (NADH) large subunit.
    
 0.726
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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