STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB18792.1Class II Aldolase and Adducin N-terminal domain-containing protein. (698 aa)    
Predicted Functional Partners:
SCB18802.1
L-rhamnose isomerase / sugar isomerase.
 
  
  0.969
SCB38456.1
Amino acid adenylation domain-containing protein.
  
 0.967
SCB18738.1
Sugar (pentulose or hexulose) kinase.
 
 
 0.949
rhaM
L-rhamnose mutarotase; Involved in the anomeric conversion of L-rhamnose.
 
  
 0.890
SCB18784.1
Transcriptional regulator, DeoR family.
 
    0.886
SCB18775.1
Rhamnose-binding protein.
 
     0.856
SCB20987.1
Thioesterase domain-containing protein.
  
 0.815
SCB41107.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.790
SCB18753.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
     0.785
SCB13841.1
Ribulose-5-phosphate 4-epimerase/Fuculose-1-phosphate aldolase.
    
 0.754
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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