STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB17640.1Protein of unknown function. (391 aa)    
Predicted Functional Partners:
SCB17633.1
S-adenosyl-L-methionine methyltransferase.
 
     0.849
SCB17646.1
Adenylate cyclase.
 
     0.806
SCB17656.1
Peptide/nickel transport system substrate-binding protein.
 
     0.744
SCB17608.1
Polysaccharide deacetylase.
  
     0.725
SCB17675.1
Predicted glycosyl transferase.
 
     0.713
SCB26386.1
Adenylate cyclase.
  
     0.695
SCB20660.1
Adenylate cyclase.
  
     0.694
SCB17694.1
Putative ABC transport system ATP-binding protein.
 
     0.693
SCB17621.1
Adenylate cyclase.
  
     0.691
SCB45288.1
Adenylate cyclase, class 3.
  
     0.687
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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