STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB20161.1Porin subfamily protein; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane. (353 aa)    
Predicted Functional Partners:
SCB31355.1
Protein of unknown function.
  
     0.770
SCB44633.1
Hypothetical protein.
  
     0.766
SCB27772.1
Hypothetical protein.
  
     0.758
SCB41991.1
Hypothetical protein.
  
     0.758
SCB36698.1
Hypothetical protein.
  
     0.752
SCB50288.1
Outer membrane immunogenic protein.
  
 
   0.746
SCB47597.1
PXPV repeat-containing protein.
  
     0.745
SCB08102.1
Hypothetical protein.
  
     0.744
SCB07395.1
Hypothetical protein.
  
     0.733
SCB22167.1
LPS-assembly lipoprotein.
 
     0.733
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.