STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB19406.1Signal transduction histidine kinase. (465 aa)    
Predicted Functional Partners:
SCB41107.1
2-oxoisovalerate dehydrogenase E1 component.
    
 0.987
SCB38593.1
PAS domain S-box-containing protein.
   
 0.978
SCB19415.1
Two-component system, OmpR family, response regulator.
 0.971
SCB11402.1
Two component transcriptional regulator, LuxR family.
  
 0.881
SCB43476.1
PAS domain S-box-containing protein.
   
 0.868
SCB24200.1
PAS domain S-box-containing protein.
 
 
 0.863
SCB11859.1
2-oxoisovalerate dehydrogenase E1 component.
    
 0.861
SCB23346.1
Diguanylate cyclase (GGDEF) domain-containing protein.
   
 0.851
SCB22496.1
PAS domain-containing protein.
 
 
 0.825
SCB49928.1
PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein.
 
 0.803
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.