STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB21106.1Predicted transcriptional regulator. (308 aa)    
Predicted Functional Partners:
SCB21101.1
alpha-N-arabinofuranosidase.
 
     0.884
SCB21113.1
Hypothetical protein.
 
     0.775
SCB21097.1
Peptide/nickel transport system substrate-binding protein.
 
     0.728
SCB41034.1
Sugar phosphate isomerase/epimerase.
  
     0.562
SCB17746.1
Alpha-galactosidase.
  
     0.555
SCB44733.1
Xylan 1,4-beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.542
SCB21089.1
Peptide/nickel transport system permease protein.
 
     0.509
SCB35257.1
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
  
     0.505
SCB21081.1
Peptide/nickel transport system ATP-binding protein.
 
     0.492
SCB21085.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.466
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.