STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB23704.1NADP oxidoreductase coenzyme F420-dependent. (278 aa)    
Predicted Functional Partners:
aroC
Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.
  
 0.913
SCB23717.1
Uncharacterized conserved protein YgbK, DUF1537 family.
 
   
 0.888
SCB23722.1
Ribulose-bisphosphate carboxylase large chain; Belongs to the RuBisCO large chain family.
 
   
 0.885
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
  
 
 0.856
SCB40558.1
Anthranilate synthase, component I /anthranilate synthase, component II.
    
 0.814
SCB44345.1
Uncharacterized conserved protein YgbK, DUF1537 family.
 
   
 0.788
SCB44349.1
Ribulose-bisphosphate carboxylase large chain; Belongs to the RuBisCO large chain family.
 
   
 0.785
SCB23697.1
Hypothetical protein.
       0.773
SCB44333.1
Hypothetical protein.
 
     0.769
SCB19091.1
Histidinol-phosphate aminotransferase.
  
 
 0.763
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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