STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB24468.1Cyclopropane-fatty-acyl-phospholipid synthase. (419 aa)    
Predicted Functional Partners:
SCB38456.1
Amino acid adenylation domain-containing protein.
    
 0.708
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.706
SCB23790.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
    
  0.555
SCB27876.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
    
  0.555
SCB37249.1
Glycine cleavage system T protein (aminomethyltransferase); Belongs to the GcvT family.
    
  0.555
SCB47966.1
Dimethylglycine dehydrogenase; Belongs to the GcvT family.
    
  0.555
SCB24461.1
Uncharacterized protein.
       0.521
SCB20987.1
Thioesterase domain-containing protein.
     
 0.487
SCB08647.1
Trehalose 6-phosphate synthase; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.
  
    0.483
SCB41599.1
cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
   
    0.477
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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