Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB07970.1 | SCB24687.1 | GA0061102_1001154 | GA0061102_101096 | 2-Methylisocitrate lyase, PEP mutase family. | Hypothetical protein. | 0.435 |
SCB16380.1 | SCB24687.1 | GA0061102_1004160 | GA0061102_101096 | Protein of unknown function. | Hypothetical protein. | 0.421 |
SCB24666.1 | SCB24673.1 | GA0061102_101093 | GA0061102_101094 | Biotin transport system substrate-specific component. | Biotin transport system permease protein. | 0.999 |
SCB24666.1 | SCB24680.1 | GA0061102_101093 | GA0061102_101095 | Biotin transport system substrate-specific component. | Biotin transport system ATP-binding protein. | 0.999 |
SCB24666.1 | SCB24687.1 | GA0061102_101093 | GA0061102_101096 | Biotin transport system substrate-specific component. | Hypothetical protein. | 0.541 |
SCB24673.1 | SCB24666.1 | GA0061102_101094 | GA0061102_101093 | Biotin transport system permease protein. | Biotin transport system substrate-specific component. | 0.999 |
SCB24673.1 | SCB24680.1 | GA0061102_101094 | GA0061102_101095 | Biotin transport system permease protein. | Biotin transport system ATP-binding protein. | 0.999 |
SCB24673.1 | SCB24687.1 | GA0061102_101094 | GA0061102_101096 | Biotin transport system permease protein. | Hypothetical protein. | 0.586 |
SCB24680.1 | SCB24666.1 | GA0061102_101095 | GA0061102_101093 | Biotin transport system ATP-binding protein. | Biotin transport system substrate-specific component. | 0.999 |
SCB24680.1 | SCB24673.1 | GA0061102_101095 | GA0061102_101094 | Biotin transport system ATP-binding protein. | Biotin transport system permease protein. | 0.999 |
SCB24680.1 | SCB24687.1 | GA0061102_101095 | GA0061102_101096 | Biotin transport system ATP-binding protein. | Hypothetical protein. | 0.586 |
SCB24687.1 | SCB07970.1 | GA0061102_101096 | GA0061102_1001154 | Hypothetical protein. | 2-Methylisocitrate lyase, PEP mutase family. | 0.435 |
SCB24687.1 | SCB16380.1 | GA0061102_101096 | GA0061102_1004160 | Hypothetical protein. | Protein of unknown function. | 0.421 |
SCB24687.1 | SCB24666.1 | GA0061102_101096 | GA0061102_101093 | Hypothetical protein. | Biotin transport system substrate-specific component. | 0.541 |
SCB24687.1 | SCB24673.1 | GA0061102_101096 | GA0061102_101094 | Hypothetical protein. | Biotin transport system permease protein. | 0.586 |
SCB24687.1 | SCB24680.1 | GA0061102_101096 | GA0061102_101095 | Hypothetical protein. | Biotin transport system ATP-binding protein. | 0.586 |
SCB24687.1 | lcdH | GA0061102_101096 | GA0061102_100770 | Hypothetical protein. | Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine. | 0.511 |
lcdH | SCB24687.1 | GA0061102_100770 | GA0061102_101096 | Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine. | Hypothetical protein. | 0.511 |