Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SCB07550.1 | SCB26994.1 | GA0061102_100193 | GA0061102_101310 | GcrA cell cycle regulator. | Transcriptional regulator, CarD family. | 0.527 |
| SCB07550.1 | SCB27000.1 | GA0061102_100193 | GA0061102_101311 | GcrA cell cycle regulator. | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.902 |
| SCB10972.1 | SCB27000.1 | GA0061102_100240 | GA0061102_101311 | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.960 |
| SCB26994.1 | SCB07550.1 | GA0061102_101310 | GA0061102_100193 | Transcriptional regulator, CarD family. | GcrA cell cycle regulator. | 0.527 |
| SCB26994.1 | SCB27000.1 | GA0061102_101310 | GA0061102_101311 | Transcriptional regulator, CarD family. | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.963 |
| SCB26994.1 | rpoA | GA0061102_101310 | GA0061102_1004116 | Transcriptional regulator, CarD family. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.981 |
| SCB26994.1 | rpoB | GA0061102_101310 | GA0061102_10727 | Transcriptional regulator, CarD family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.980 |
| SCB26994.1 | rpoC | GA0061102_101310 | GA0061102_10726 | Transcriptional regulator, CarD family. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.979 |
| SCB26994.1 | rpoZ | GA0061102_101310 | GA0061102_102119 | Transcriptional regulator, CarD family. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.982 |
| SCB27000.1 | SCB07550.1 | GA0061102_101311 | GA0061102_100193 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | GcrA cell cycle regulator. | 0.902 |
| SCB27000.1 | SCB10972.1 | GA0061102_101311 | GA0061102_100240 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase. | 0.960 |
| SCB27000.1 | SCB26994.1 | GA0061102_101311 | GA0061102_101310 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Transcriptional regulator, CarD family. | 0.963 |
| SCB27000.1 | SCB30966.1 | GA0061102_101311 | GA0061102_101793 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | AraC family transcriptional regulator. | 0.938 |
| SCB27000.1 | SCB43111.1 | GA0061102_101311 | GA0061102_103920 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-binding transcriptional regulator, MerR family. | 0.953 |
| SCB27000.1 | nusA | GA0061102_101311 | GA0061102_106710 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | NusA antitermination factor; Participates in both transcription termination and antitermination. | 0.912 |
| SCB27000.1 | rpoA | GA0061102_101311 | GA0061102_1004116 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.987 |
| SCB27000.1 | rpoB | GA0061102_101311 | GA0061102_10727 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.989 |
| SCB27000.1 | rpoC | GA0061102_101311 | GA0061102_10726 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
| SCB27000.1 | rpoZ | GA0061102_101311 | GA0061102_102119 | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.969 |
| SCB30966.1 | SCB27000.1 | GA0061102_101793 | GA0061102_101311 | AraC family transcriptional regulator. | RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.938 |
page 1 of 4