Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB21038.1 | SCB28520.1 | GA0061102_100790 | GA0061102_1014101 | Major curlin subunit. | Glycosyl transferase, family 25. | 0.452 |
SCB21038.1 | SCB42209.1 | GA0061102_100790 | GA0061102_103634 | Major curlin subunit. | Hypothetical protein. | 0.440 |
SCB28514.1 | SCB28520.1 | GA0061102_101499 | GA0061102_1014101 | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | Glycosyl transferase, family 25. | 0.447 |
SCB28520.1 | SCB21038.1 | GA0061102_1014101 | GA0061102_100790 | Glycosyl transferase, family 25. | Major curlin subunit. | 0.452 |
SCB28520.1 | SCB28514.1 | GA0061102_1014101 | GA0061102_101499 | Glycosyl transferase, family 25. | Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. | 0.447 |
SCB28520.1 | SCB42209.1 | GA0061102_1014101 | GA0061102_103634 | Glycosyl transferase, family 25. | Hypothetical protein. | 0.471 |
SCB28520.1 | SCB44752.1 | GA0061102_1014101 | GA0061102_104536 | Glycosyl transferase, family 25. | Predicted secreted Zn-dependent protease. | 0.485 |
SCB42209.1 | SCB21038.1 | GA0061102_103634 | GA0061102_100790 | Hypothetical protein. | Major curlin subunit. | 0.440 |
SCB42209.1 | SCB28520.1 | GA0061102_103634 | GA0061102_1014101 | Hypothetical protein. | Glycosyl transferase, family 25. | 0.471 |
SCB44752.1 | SCB28520.1 | GA0061102_104536 | GA0061102_1014101 | Predicted secreted Zn-dependent protease. | Glycosyl transferase, family 25. | 0.485 |