STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB28180.1acyl-CoA dehydrogenase. (392 aa)    
Predicted Functional Partners:
SCB28174.1
Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.985
SCB28210.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.978
SCB07282.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase.
 
 0.958
SCB11890.1
3-hydroxyacyl-CoA dehydrogenase.
 
 0.957
SCB23842.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.941
SCB08491.1
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
  0.935
SCB41589.1
Electron transfer flavoprotein alpha subunit apoprotein.
 0.922
SCB28157.1
anthraniloyl-CoA monooxygenase.
 
 
 0.917
SCB23836.1
Electron transfer flavoprotein beta subunit.
 
 
 0.891
SCB41594.1
Electron transfer flavoprotein beta subunit.
 
 
 0.889
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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