Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB23770.1 | SCB23776.1 | GA0061102_1009116 | GA0061102_1009117 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Sarcosine oxidase subunit delta. | 0.999 |
SCB23770.1 | SCB30622.1 | GA0061102_1009116 | GA0061102_101732 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Sarcosine oxidase subunit alpha. | 0.704 |
SCB23770.1 | SCB30631.1 | GA0061102_1009116 | GA0061102_101733 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Sarcosine oxidase subunit delta. | 0.998 |
SCB23770.1 | SCB30680.1 | GA0061102_1009116 | GA0061102_101740 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Glycine/D-amino acid oxidase. | 0.975 |
SCB23770.1 | SCB31849.1 | GA0061102_1009116 | GA0061102_1018110 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Glutamate synthase (NADH) large subunit. | 0.837 |
SCB23770.1 | SCB38456.1 | GA0061102_1009116 | GA0061102_102830 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Amino acid adenylation domain-containing protein. | 0.831 |
SCB23770.1 | SCB46938.1 | GA0061102_1009116 | GA0061102_105611 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Sarcosine oxidase subunit alpha. | 0.720 |
SCB23770.1 | SCB46953.1 | GA0061102_1009116 | GA0061102_105614 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Assimilatory nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.710 |
SCB23770.1 | SCB47957.1 | GA0061102_1009116 | GA0061102_106217 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Sarcosine oxidase subunit alpha. | 0.716 |
SCB23770.1 | gcvP | GA0061102_1009116 | GA0061102_104616 | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.990 |
SCB23776.1 | SCB23770.1 | GA0061102_1009117 | GA0061102_1009116 | Sarcosine oxidase subunit delta. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.999 |
SCB23776.1 | SCB30622.1 | GA0061102_1009117 | GA0061102_101732 | Sarcosine oxidase subunit delta. | Sarcosine oxidase subunit alpha. | 0.998 |
SCB23776.1 | SCB30631.1 | GA0061102_1009117 | GA0061102_101733 | Sarcosine oxidase subunit delta. | Sarcosine oxidase subunit delta. | 0.670 |
SCB23776.1 | SCB30680.1 | GA0061102_1009117 | GA0061102_101740 | Sarcosine oxidase subunit delta. | Glycine/D-amino acid oxidase. | 0.640 |
SCB23776.1 | SCB31849.1 | GA0061102_1009117 | GA0061102_1018110 | Sarcosine oxidase subunit delta. | Glutamate synthase (NADH) large subunit. | 0.710 |
SCB23776.1 | SCB46938.1 | GA0061102_1009117 | GA0061102_105611 | Sarcosine oxidase subunit delta. | Sarcosine oxidase subunit alpha. | 0.998 |
SCB23776.1 | SCB47957.1 | GA0061102_1009117 | GA0061102_106217 | Sarcosine oxidase subunit delta. | Sarcosine oxidase subunit alpha. | 0.998 |
SCB23776.1 | gcvP | GA0061102_1009117 | GA0061102_104616 | Sarcosine oxidase subunit delta. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.652 |
SCB30622.1 | SCB23770.1 | GA0061102_101732 | GA0061102_1009116 | Sarcosine oxidase subunit alpha. | Sarcosine oxidase subunit alpha; Belongs to the GcvT family. | 0.704 |
SCB30622.1 | SCB23776.1 | GA0061102_101732 | GA0061102_1009117 | Sarcosine oxidase subunit alpha. | Sarcosine oxidase subunit delta. | 0.998 |
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