Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SCB08517.1 | SCB24170.1 | GA0061102_1001224 | GA0061102_101017 | 2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.618 |
SCB08517.1 | SCB31702.1 | GA0061102_1001224 | GA0061102_101886 | 2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | Hypothetical protein. | 0.510 |
SCB08517.1 | SCB31707.1 | GA0061102_1001224 | GA0061102_101887 | 2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | Hypothetical protein. | 0.510 |
SCB24170.1 | SCB08517.1 | GA0061102_101017 | GA0061102_1001224 | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.618 |
SCB24170.1 | SCB31702.1 | GA0061102_101017 | GA0061102_101886 | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Hypothetical protein. | 0.464 |
SCB24170.1 | SCB31707.1 | GA0061102_101017 | GA0061102_101887 | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | Hypothetical protein. | 0.464 |
SCB31689.1 | SCB31695.1 | GA0061102_101884 | GA0061102_101885 | Polysaccharide deacetylase. | Glycosyltransferase involved in LPS biosynthesis, GR25 family. | 0.780 |
SCB31689.1 | SCB31702.1 | GA0061102_101884 | GA0061102_101886 | Polysaccharide deacetylase. | Hypothetical protein. | 0.483 |
SCB31689.1 | SCB31707.1 | GA0061102_101884 | GA0061102_101887 | Polysaccharide deacetylase. | Hypothetical protein. | 0.483 |
SCB31695.1 | SCB31689.1 | GA0061102_101885 | GA0061102_101884 | Glycosyltransferase involved in LPS biosynthesis, GR25 family. | Polysaccharide deacetylase. | 0.780 |
SCB31695.1 | SCB31702.1 | GA0061102_101885 | GA0061102_101886 | Glycosyltransferase involved in LPS biosynthesis, GR25 family. | Hypothetical protein. | 0.505 |
SCB31695.1 | SCB31707.1 | GA0061102_101885 | GA0061102_101887 | Glycosyltransferase involved in LPS biosynthesis, GR25 family. | Hypothetical protein. | 0.505 |
SCB31702.1 | SCB08517.1 | GA0061102_101886 | GA0061102_1001224 | Hypothetical protein. | 2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.510 |
SCB31702.1 | SCB24170.1 | GA0061102_101886 | GA0061102_101017 | Hypothetical protein. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.464 |
SCB31702.1 | SCB31689.1 | GA0061102_101886 | GA0061102_101884 | Hypothetical protein. | Polysaccharide deacetylase. | 0.483 |
SCB31702.1 | SCB31695.1 | GA0061102_101886 | GA0061102_101885 | Hypothetical protein. | Glycosyltransferase involved in LPS biosynthesis, GR25 family. | 0.505 |
SCB31702.1 | SCB31707.1 | GA0061102_101886 | GA0061102_101887 | Hypothetical protein. | Hypothetical protein. | 0.781 |
SCB31702.1 | SCB31714.1 | GA0061102_101886 | GA0061102_101888 | Hypothetical protein. | Hypothetical protein. | 0.525 |
SCB31707.1 | SCB08517.1 | GA0061102_101887 | GA0061102_1001224 | Hypothetical protein. | 2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily. | 0.510 |
SCB31707.1 | SCB24170.1 | GA0061102_101887 | GA0061102_101017 | Hypothetical protein. | 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family. | 0.464 |
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