STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB35227.1Putative xylitol transport system substrate-binding protein. (329 aa)    
Predicted Functional Partners:
SCB35234.1
Putative xylitol transport system permease protein.
  0.993
SCB35241.1
Putative xylitol transport system ATP-binding protein.
 
  0.986
SCB43476.1
PAS domain S-box-containing protein.
   
 0.967
SCB11396.1
Signal transduction histidine kinase.
   
 0.948
SCB08284.1
Signal transduction histidine kinase.
    
 0.945
SCB14508.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
  0.851
SCB22964.1
Inositol transport system permease protein.
 
  0.842
SCB34580.1
Inositol transport system permease protein.
 
  0.841
SCB13729.1
Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
  0.817
SCB35021.1
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
 
  0.817
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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