STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCB35386.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (255 aa)    
Predicted Functional Partners:
SCB38456.1
Amino acid adenylation domain-containing protein.
 
 0.967
SCB20987.1
Thioesterase domain-containing protein.
  
 0.806
SCB41107.1
2-oxoisovalerate dehydrogenase E1 component.
  
 0.787
SCB35905.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
     0.769
SCB42420.1
Short chain dehydrogenase.
  
     0.712
SCB31849.1
Glutamate synthase (NADH) large subunit.
     
 0.699
SCB46092.1
Short chain dehydrogenase.
  
  
  0.696
SCB37108.1
DNA repair exonuclease SbcCD nuclease subunit.
    
   0.673
lcdH
Carnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.
  
 0.665
SCB14440.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
  
 
  0.626
Your Current Organism:
Rhizobium miluonense
NCBI taxonomy Id: 411945
Other names: CCBAU 41251, HAMBI 2971, LMG 24208, LMG:24208, R. miluonense, Rhizobium miluonense Gu et al. 2008, Rhizobium sp. CCBAU 41251
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.